1 MA plots

All MA plots now have an FDR of 0.01 and no fold-change cutoff.

1.1 No gene labels

Cold v Ctrl MA plot

Hot v Ctrl MA plot

1.2 Labeled by padj

Cold v Ctrl MA plot

Hot v Ctrl MA plot

1.3 GWAS points

Cold v Ctrl MA plot

Hot v Ctrl MA plot

1.4 GWAS labels

Cold v Ctrl MA plot

Hot v Ctrl MA plot

1.5 GWAS labels colored by DEG sig

Cold v Ctrl MA plot

Hot v Ctrl MA plot

2 Top 50 differentially expressed genes

2.1 Heat shock

gene hot_fc log2FoldChange.hot padj.hot
CG3339 down -5.155 1.097e-27
l(2)08717 down -2.3 4.051e-25
pip down -3.434 5.188e-24
stan down -2.592 2.063e-23
Dhc36C down -2.724 1.51e-22
ft down -3.361 4.602e-22
CG17075 down -2.455 5.379e-22
CG1801 down -3.692 2.458e-21
CG9492 down -4.122 2.881e-20
Dhc93AB down -3.104 1.029e-19
Dscam1 down -1.795 1.792e-19
CG42534 down -4.148 4.16e-19
CG6125 down -2.153 7.197e-19
CG1688 down -3.061 8.789e-19
btv down -4.624 1.002e-18
Sb down -4.59 1.126e-18
CG43980 down -4.82 1.34e-18
Muc14A down -2.612 1.372e-18
hiw down -1.521 1.414e-18
CG3348 down -3.219 1.822e-18
Nos down -3.834 2.877e-18
CG30263 down -3.978 4.212e-18
jv down -2.334 4.212e-18
conv down -4.136 4.94e-18
NT1 down -6.652 4.94e-18
Dop1R1 down -2.643 6.474e-18
Shawl down -3.459 8.688e-18
CG8745 down -2.145 1.314e-17
CG14304 down -4.486 1.542e-17
CG31465 down -6.373 2.078e-17
Ugt86Di down -5.074 4.038e-17
CR44327 down -2.536 4.654e-17
salr down -3.028 4.671e-17
nompC down -3.89 6.068e-17
SIFaR down -4.022 6.357e-17
Nlg4 down -2.488 8.891e-17
CG15894 down -2.427 1.946e-16
Cda5 down -1.12 2.097e-16
CG4744 down -6.327 2.705e-16
eag down -1.729 2.931e-16
CG30272 down -3.39 3.009e-16
Ac78C down -2.352 3.672e-16
CG45105 down -3.336 4.007e-16
Rab26 down -2.214 4.049e-16
CG12950 down -2.918 4.628e-16
CG32791 down -1.702 5.419e-16
TkR99D down -3.825 8.6e-16
Ddr down -3.329 9.219e-16
GABA-B-R1 down -2.256 1.09e-15
Sytbeta down -3.292 1.449e-15
Hsp68 up 6.888 0
DnaJ-1 up 3.727 2.219e-143
Hsp70Bb up 7.003 2.219e-143
stv up 4.471 2.373e-104
Hsp26 up 4.279 5.676e-72
Hsp67Bc up 4.785 2.957e-71
Hsp27 up 3.532 4.06e-62
Hsp83 up 2.106 6.281e-58
Hsp23 up 6.872 8.789e-53
Nop17l up 1.614 7.563e-52
CG6770 up 1.78 5.402e-48
Hop up 1.305 1.268e-43
CG42240 up 1.131 1.65e-41
Hsc70Cb up 1.271 5.313e-38
Jafrac1 up 0.8308 7.251e-38
CG16721 up 1.484 1.699e-36
CG1416 up 1.24 1.833e-34
CG5290 up 1.882 8.359e-34
Droj2 up 1.165 9.102e-33
Hsc70-3 up 1.522 2.984e-32
Lsd-2 up 1.004 2.845e-30
alphagamma-element:CR32865 up 6.317 1.507e-29
sra up 1.258 9.836e-29
CG10600 up 1.189 1.267e-28
Mlf up 1.019 1.689e-28
Capr up 0.9256 6.875e-28
mim up 1.18 1.125e-26
Hsp70Bc up 5.778 5.299e-26
CG10077 up 1.398 5.714e-26
Pgi up 0.9688 3e-25
ref(2)P up 1.398 7.851e-24
CG7033 up 1.009 4.144e-23
e(y)3 up 0.9014 8.199e-23
Trxr-1 up 1.139 1.335e-22
Pa1 up 1.987 1.445e-22
CG1943 up 1.14 1.445e-22
PEK up 1.254 5.637e-22
GstD1 up 0.8593 7.088e-22
phol up 1.028 8.707e-22
CG3680 up 0.8435 4.633e-21
TfIIEalpha up 1.076 1.121e-20
da up 0.8578 2.725e-20
cact up 0.8173 3.294e-20
Ran up 0.7748 6.905e-20
CG1677 up 0.8251 9.427e-20
betaTub56D up 1.038 1.749e-19
Cctgamma up 0.8277 6.345e-19
BRWD3 up 0.8852 7.197e-19
l(1)G0469 up 1.272 7.197e-19
Pdk up 1.35 1.224e-18

2.2 Cold shock

gene cold_fc log2FoldChange.cold padj.cold
stan down -2.535 2.296e-20
Dhc93AB down -3.204 2.253e-19
CG3339 down -4.294 5.99e-19
CG1801 down -3.666 5.99e-19
CG3280 down -3.068 5.99e-19
CG42534 down -4.469 7.335e-19
CG32791 down -1.855 1.687e-17
ft down -2.987 8.646e-17
pip down -2.89 1.435e-16
Dscam1 down -1.683 2.136e-16
CG43163 down -3.52 4.912e-16
CG9492 down -3.725 5.06e-16
rk down -3.238 8.245e-16
Dhc36C down -2.296 1.463e-15
CG8219 down -5.491 1.463e-15
SIFaR down -4.039 2.331e-15
Ac78C down -2.361 3.608e-15
Ddr down -3.388 6.724e-15
d down -3.775 1.027e-14
CR45604 down -3.018 1.027e-14
mtt down -3.664 1.135e-14
Dhc62B down -3.892 1.49e-14
iav down -4.075 1.696e-14
CR45272 down -4.647 2.839e-14
prom down -2.737 2.839e-14
CG18519 down -3.233 2.839e-14
CG43110 down -3.216 4.113e-14
Nep5 down -3.804 4.113e-14
conv down -3.69 6.626e-14
rdgC down -1.94 6.946e-14
Shawl down -3.097 7.672e-14
CG44153 down -3.691 8.047e-14
Hsp68 down -1.071 8.344e-14
GluRIB down -2.415 9.254e-14
CG45002 down -1.938 9.254e-14
Sb down -3.89 1.557e-13
Nlg4 down -2.28 1.557e-13
CG4744 down -5.989 1.789e-13
trh down -2.138 2.011e-13
btv down -3.901 2.345e-13
rdo down -3.167 2.827e-13
Dop1R1 down -2.284 4.304e-13
unc-13-4A down -2.109 4.464e-13
TrpA1 down -4.111 4.79e-13
CG42255 down -1.631 5.093e-13
CG31814 down -3.185 5.781e-13
rad down -1.922 6.059e-13
Muc68Ca down -3.064 6.059e-13
CG43795 down -2.427 6.591e-13
eag down -1.562 7.105e-13
Jafrac1 up 0.6228 1.102e-19
Lsd-2 up 0.8045 1.486e-18
endos up 0.7605 1.544e-17
D1 up 0.684 1.687e-17
Muc4B up 2.542 1.687e-17
Capr up 0.7236 2.497e-16
CG14478 up 0.8465 3.717e-15
CG1677 up 0.73 7.404e-15
Ran up 0.6814 7.51e-15
CG15771 up 0.6845 1.537e-14
bif up 0.7919 2.869e-14
GstD1 up 0.7024 3.842e-14
e(y)3 up 0.7182 4.174e-14
mts up 0.638 6.428e-14
phol up 0.8291 9.254e-14
east up 0.7952 1.511e-13
Act5C up 0.6184 2.345e-13
CG8223 up 0.9441 2.752e-13
cact up 0.6657 4.446e-13
Rip11 up 0.7142 5.651e-13
CG1440 up 0.6414 5.951e-13
ssx up 0.6681 7.105e-13
swa up 0.8273 1.017e-12
tral up 0.8757 1.203e-12
CG1943 up 0.8542 1.883e-12
Pen up 0.898 2.887e-12
cib up 0.8765 3.891e-12
nocte up 0.7272 5.576e-12
CG6597 up 0.6554 5.593e-12
CG8963 up 0.6505 5.707e-12
mim up 0.7948 6.11e-12
Hmt4-20 up 0.7751 6.589e-12
CG12262 up 0.8364 1.29e-11
26-29-p up 0.8999 1.457e-11
rngo up 0.6756 1.476e-11
Jupiter up 0.6516 1.526e-11
CG4511 up 0.7374 1.68e-11
da up 0.6498 1.814e-11
pr-set7 up 0.8255 2.345e-11
Cap up 0.775 2.683e-11
CG10492 up 0.844 2.975e-11
Gapdh2 up 0.7177 3.343e-11
Rpt1 up 0.5432 3.942e-11
Df31 up 0.7823 4.048e-11
CG8108 up 0.6396 4.688e-11
betaTub56D up 0.7807 5.6e-11
Upf1 up 0.6236 5.655e-11
CG9705 up 0.7375 8.723e-11
Abi up 0.6488 8.733e-11
Amun up 0.7009 9.284e-11

3 DEG LFC scatter & GWAS Density

3.1 GWAS scatter & density plots (10^-5)

K.S. pairwise comparisons of the distributions of top GWAS genes under shock
GWAS distributions Heat-shock Cold-shock
Other vs. CTmin 0.5641033 0.5775028
Other vs. CTmax 0.4426838 0.6970872
CTmin vs. CTmax 0.5715501 0.8135801

3.2 GWAS scatter & density plots (10^-4)

K.S. pairwise comparisons of the distributions of top GWAS genes under shock
GWAS distributions Heat-shock Cold-shock
Other vs. CTmin 0.1562769 0.0624962
Other vs. CTmax 0.0063858 0.0102758
CTmin vs. CTmax 0.1697556 0.0511528

4 GWAS (pval cutoff 10^-5)

4.1 Summary

GWAS SNPs SNPs annotated to genes Unique genes Sig DEGs NS DEGs No RNAseq data
CTmax 21 19 12 9 3 0
CTmin 53 50 26 11 12 3
ThermalBreadth 23 19 17 NA NA 17

4.2 Venn Diagram: SNPs & Genes

A) The top GWAS SNPs (10^-5) associated with each phenotype. B. The unique genes associated with those top SNPs

  1. The top GWAS SNPs (10^-5) associated with each phenotype. B. The unique genes associated with those top SNPs

4.3 CTmax

4.3.1 All hits

ID gene grps AvgMixedPval
2R_10330800_INS Oaz INTRON 8.0e-07
2R_6398772_SNP lola INTRON 9.0e-07
2R_6398743_SNP lola INTRON 9.0e-07
2R_10330805_SNP Oaz INTRON 1.0e-06
3R_22515826_SNP 2.3e-06
2L_12384183_SNP bru-2 INTRON 2.4e-06
3R_25373467_SNP 2.5e-06
2R_17564376_SNP CG30263 SYNONYMOUS_CODING 2.6e-06
2R_10330722_SNP Oaz INTRON 3.0e-06
X_3381582_SNP CR44999 INTRON 3.2e-06
X_3381582_SNP CG10803 INTRON 3.2e-06
X_3381590_SNP CG10803 INTRON 3.2e-06
X_3381590_SNP CR44999 INTRON 3.2e-06
2R_10330717_SNP Oaz INTRON 3.5e-06
X_3381391_SNP CR44999 INTRON 3.7e-06
X_3381391_SNP CG10803 INTRON 3.7e-06
X_3381587_SNP CR44999 INTRON 4.1e-06
X_3381587_SNP CG10803 INTRON 4.1e-06
3L_9575326_SNP CG42673 INTRON 6.0e-06
X_5876026_SNP Grip INTRON 6.0e-06
3R_3427376_SNP CG34127 INTRON 7.6e-06
2L_19428598_SNP CG13085 INTRON 8.4e-06
2L_19428598_SNP CG16771 INTRON 8.4e-06
2R_10330701_SNP Oaz INTRON 9.7e-06
2L_19428336_SNP CG13085 INTRON 9.9e-06
2L_19428336_SNP CG16771 INTRON 9.9e-06
3R_20025347_SNP twin INTRON 1.0e-05

4.3.2 Group count

grps n
INTRON 24
SYNONYMOUS_CODING 1

4.3.3 Gene counts

gene n
Oaz 5
CG10803 4
CR44999 4
CG13085 2
CG16771 2
lola 2
bru-2 1
CG30263 1
CG34127 1
CG42673 1
Grip 1
twin 1

4.4 CTmin

4.4.1 All hits

ID gene grps AvgMixedPval
2R_20313579_SNP prom INTRON 0.0e+00
2R_20313579_SNP CG42383 INTRON 0.0e+00
X_4385442_SNP CR32773 INTRON 1.0e-07
3R_13900959_SNP 2.0e-07
2R_20308502_SNP prom INTRON 4.0e-07
3R_12992895_SNP Mur89F INTRON 7.0e-07
2R_20313917_SNP prom INTRON 9.0e-07
2R_20313922_DEL prom INTRON 9.0e-07
2R_20313930_SNP prom INTRON 9.0e-07
2R_20313933_SNP prom INTRON 9.0e-07
2R_20313935_INS prom INTRON 9.0e-07
2R_20313938_SNP prom INTRON 9.0e-07
2R_20313940_MNP prom INTRON 9.0e-07
2R_20308558_SNP prom INTRON 1.0e-06
2R_20250118_SNP bs INTRON 1.0e-06
2R_20250118_SNP CR44811 INTRON 1.0e-06
2R_20301097_SNP CG45068 SYNONYMOUS_CODING 1.1e-06
2R_20301097_SNP CG45069 SYNONYMOUS_CODING 1.1e-06
2R_20301239_SNP CG45068 NON_SYNONYMOUS_CODING 1.1e-06
2R_20301239_SNP CG45069 NON_SYNONYMOUS_CODING 1.1e-06
2R_20308533_SNP prom INTRON 1.2e-06
2R_20313914_SNP prom INTRON 1.3e-06
2L_2612712_SNP 1.4e-06
2R_20313927_SNP prom INTRON 1.5e-06
2R_20313911_SNP prom INTRON 1.8e-06
2R_20307893_SNP prom NON_SYNONYMOUS_CODING 1.8e-06
2R_20313916_SNP prom INTRON 1.9e-06
2R_20308565_SNP prom INTRON 1.9e-06
2R_20309964_SNP prom INTRON 2.0e-06
2R_20309106_SNP prom INTRON 2.2e-06
3R_11364111_SNP CG18519 SYNONYMOUS_CODING 2.2e-06
2R_20313919_SNP prom INTRON 2.4e-06
3R_14850882_SNP CG14285 NON_SYNONYMOUS_CODING 3.1e-06
3R_14850882_SNP CG14286 NON_SYNONYMOUS_CODING 3.1e-06
2R_20313912_SNP prom INTRON 3.2e-06
2L_3465546_SNP msl-2 NON_SYNONYMOUS_CODING 3.2e-06
2L_3465546_SNP Pdsw NON_SYNONYMOUS_CODING 3.2e-06
2R_20301123_SNP CG45069 UTR_5_PRIME 3.3e-06
2R_20301123_SNP CG45068 UTR_5_PRIME 3.3e-06
3R_13552400_SNP Lgr1 INTRON 3.6e-06
3R_11367299_SNP CG18519 NON_SYNONYMOUS_CODING 4.0e-06
3R_11288771_SNP AdamTS-A INTRON 4.2e-06
2R_20301091_SNP CG45069 UTR_5_PRIME 4.2e-06
2R_20301091_SNP CG45068 UTR_5_PRIME 4.2e-06
2R_12301745_SNP Sema-2b INTRON 4.2e-06
2R_12301745_SNP Menl-2 INTRON 4.2e-06
3R_12990694_SNP Mur89F INTRON 4.3e-06
2R_20309307_SNP prom INTRON 4.8e-06
3R_9949217_SNP twf SYNONYMOUS_CODING 5.6e-06
3R_9949217_SNP 140up SYNONYMOUS_CODING 5.6e-06
3R_13002842_SNP Mur89F INTRON 5.7e-06
2R_20309122_SNP prom INTRON 5.8e-06
3R_12997215_SNP Mur89F INTRON 6.0e-06
2L_3396579_SNP CR44792 DOWNSTREAM 6.6e-06
2L_3396577_SNP CR44792 DOWNSTREAM 6.7e-06
3R_13552010_SNP Lgr1 INTRON 6.7e-06
3L_4694662_SNP CG15876 SYNONYMOUS_CODING 7.5e-06
3L_4694662_SNP RhoGEF64C SYNONYMOUS_CODING 7.5e-06
X_5639729_SNP IntS6 INTRON 7.5e-06
2L_2612282_INS CG15395 DOWNSTREAM 7.6e-06
2R_7024700_SNP BBS4 SYNONYMOUS_CODING 7.8e-06
2R_20313809_SNP prom INTRON 9.0e-06
3L_5853164_SNP 9.6e-06
2L_3885863_SNP capu INTRON 9.7e-06

4.4.2 Group count

grps n
INTRON 38
NON_SYNONYMOUS_CODING 8
SYNONYMOUS_CODING 8
UTR_5_PRIME 4
DOWNSTREAM 3

4.4.3 Gene counts

gene n
prom 24
CG45068 4
CG45069 4
Mur89F 4
CG18519 2
CR44792 2
Lgr1 2
140up 1
AdamTS-A 1
BBS4 1
bs 1
capu 1
CG14285 1
CG14286 1
CG15395 1
CG15876 1
CG42383 1
CR32773 1
CR44811 1
IntS6 1
Menl-2 1
msl-2 1
Pdsw 1
RhoGEF64C 1
Sema-2b 1
twf 1

4.5 Thermal Breadth

4.5.1 All hits

ID gene grps AvgMixedPval
3R_12992895_SNP Mur89F INTRON 1.0e-07
2R_20313579_SNP prom INTRON 6.0e-07
2R_20313579_SNP CG42383 INTRON 6.0e-07
2R_7024700_SNP BBS4 SYNONYMOUS_CODING 8.0e-07
3R_13900959_SNP 1.3e-06
2R_20301097_SNP CG45068 SYNONYMOUS_CODING 1.4e-06
2R_20301097_SNP CG45069 SYNONYMOUS_CODING 1.4e-06
2R_20301239_SNP CG45068 NON_SYNONYMOUS_CODING 1.4e-06
2R_20301239_SNP CG45069 NON_SYNONYMOUS_CODING 1.4e-06
2L_2612712_SNP 1.9e-06
3R_13552010_SNP Lgr1 INTRON 3.0e-06
2R_20301123_SNP CG45069 UTR_5_PRIME 3.3e-06
2R_20301123_SNP CG45068 UTR_5_PRIME 3.3e-06
2R_20301091_SNP CG45069 UTR_5_PRIME 3.4e-06
2R_20301091_SNP CG45068 UTR_5_PRIME 3.4e-06
3R_5905483_SNP 3.6e-06
X_4385442_SNP CR32773 INTRON 4.3e-06
3R_13552400_SNP Lgr1 INTRON 4.5e-06
2L_20784197_SNP 5.6e-06
2L_3465546_SNP msl-2 NON_SYNONYMOUS_CODING 5.7e-06
2L_3465546_SNP Pdsw NON_SYNONYMOUS_CODING 5.7e-06
3R_12991699_SNP Mur89F INTRON 6.1e-06
3R_12990694_SNP Mur89F INTRON 6.3e-06
3L_997191_SNP trio DOWNSTREAM 6.6e-06
3R_4488005_SNP p SYNONYMOUS_CODING 7.3e-06
3R_5901971_SNP CG5361 UPSTREAM 7.3e-06
X_18252257_DEL CG6106 UPSTREAM 8.1e-06
2R_20250118_SNP bs INTRON 9.4e-06
2R_20250118_SNP CR44811 INTRON 9.4e-06
X_5639729_SNP IntS6 INTRON 9.6e-06

4.5.2 Group count

grps n
INTRON 11
NON_SYNONYMOUS_CODING 4
SYNONYMOUS_CODING 4
UTR_5_PRIME 4
UPSTREAM 2
DOWNSTREAM 1

4.5.3 Gene counts

gene n
CG45068 4
CG45069 4
Mur89F 3
Lgr1 2
BBS4 1
bs 1
CG42383 1
CG5361 1
CG6106 1
CR32773 1
CR44811 1
IntS6 1
msl-2 1
p 1
Pdsw 1
prom 1
trio 1

5 GWAS Tables (pval cutoff 10^-4)

5.1 Summary

GWAS SNPs SNPs annotated to genes Unique genes Sig DEGs NS DEGs No RNAseq data
CTmax 193 169 99 59 39 1
CTmin 348 262 151 72 72 7
ThermalBreadth 358 297 188 NA NA 188

5.2 Venn Diagram: SNPs & Genes

A) The top GWAS SNPs (10^-4) associated with each phenotype. B. The unique genes associated with those top SNPs

  1. The top GWAS SNPs (10^-4) associated with each phenotype. B. The unique genes associated with those top SNPs

5.3 CTmax

5.3.1 All hits

ID gene grps AvgMixedPval
2R_10330800_INS Oaz INTRON 8.00e-07
2R_6398772_SNP lola INTRON 9.00e-07
2R_6398743_SNP lola INTRON 9.00e-07
2R_10330805_SNP Oaz INTRON 1.00e-06
3R_22515826_SNP 2.30e-06
2L_12384183_SNP bru-2 INTRON 2.40e-06
3R_25373467_SNP 2.50e-06
2R_17564376_SNP CG30263 SYNONYMOUS_CODING 2.60e-06
2R_10330722_SNP Oaz INTRON 3.00e-06
X_3381582_SNP CR44999 INTRON 3.20e-06
X_3381582_SNP CG10803 INTRON 3.20e-06
X_3381590_SNP CG10803 INTRON 3.20e-06
X_3381590_SNP CR44999 INTRON 3.20e-06
2R_10330717_SNP Oaz INTRON 3.50e-06
X_3381391_SNP CR44999 INTRON 3.70e-06
X_3381391_SNP CG10803 INTRON 3.70e-06
X_3381587_SNP CR44999 INTRON 4.10e-06
X_3381587_SNP CG10803 INTRON 4.10e-06
3L_9575326_SNP CG42673 INTRON 6.00e-06
X_5876026_SNP Grip INTRON 6.00e-06
3R_3427376_SNP CG34127 INTRON 7.60e-06
2L_19428598_SNP CG13085 INTRON 8.40e-06
2L_19428598_SNP CG16771 INTRON 8.40e-06
2R_10330701_SNP Oaz INTRON 9.70e-06
2L_19428336_SNP CG13085 INTRON 9.90e-06
2L_19428336_SNP CG16771 INTRON 9.90e-06
3R_20025347_SNP twin INTRON 1.00e-05
2R_10330633_INS Oaz INTRON 1.02e-05
3L_14419091_SNP bbg INTRON 1.03e-05
2R_10330626_SNP Oaz INTRON 1.04e-05
2R_10330630_SNP Oaz INTRON 1.04e-05
2R_10330637_SNP Oaz INTRON 1.04e-05
2L_12339508_INS CG31862 DOWNSTREAM 1.13e-05
3R_12743515_SNP iab-8 INTRON 1.18e-05
3R_22504616_SNP beat-VII INTRON 1.20e-05
2L_12339516_SNP CG31862 DOWNSTREAM 1.23e-05
2L_19428576_SNP CG16771 SYNONYMOUS_CODING 1.24e-05
2L_19428576_SNP CG13085 SYNONYMOUS_CODING 1.24e-05
2R_10330676_DEL Oaz INTRON 1.25e-05
2R_10330688_SNP Oaz INTRON 1.25e-05
2R_10330693_SNP Oaz INTRON 1.25e-05
2L_19428030_SNP CG13085 INTRON 1.27e-05
2L_19428030_SNP CG16771 INTRON 1.27e-05
2L_19437195_SNP CG10237 INTRON 1.30e-05
2R_10330686_SNP Oaz INTRON 1.32e-05
X_10735255_SNP sbr INTRON 1.32e-05
X_10735255_SNP CG15209 INTRON 1.32e-05
X_10735262_INS sbr INTRON 1.32e-05
X_10735262_INS CG15209 INTRON 1.32e-05
2L_12339502_SNP CG31862 DOWNSTREAM 1.34e-05
2L_19429383_SNP CG13085 INTRON 1.37e-05
2L_19429383_SNP CG16771 INTRON 1.37e-05
3L_1853643_SNP CG13936 INTRON 1.42e-05
2R_10330636_SNP Oaz INTRON 1.43e-05
3R_20025331_SNP twin INTRON 1.44e-05
3R_22137625_SNP 1.46e-05
X_5876030_SNP Grip INTRON 1.48e-05
3R_6790711_SNP 1.56e-05
X_10125128_DEL Ipod UTR_3_PRIME 1.59e-05
X_3381972_SNP CG10803 SYNONYMOUS_CODING 1.60e-05
X_3381972_SNP CR44999 SYNONYMOUS_CODING 1.60e-05
3R_3427301_SNP CG34127 INTRON 1.62e-05
2R_10330615_SNP Oaz INTRON 1.63e-05
2R_10330665_SNP Oaz INTRON 1.70e-05
X_16041977_SNP disco-r INTRON 1.70e-05
3L_11137528_SNP CG32082 INTRON 1.75e-05
3L_22193099_INS olf413 INTRON 1.75e-05
X_3381054_SNP CR44999 INTRON 1.78e-05
X_3381054_SNP CG10803 INTRON 1.78e-05
2L_12384190_SNP bru-2 INTRON 1.81e-05
X_14256062_SNP dpr8 INTRON 1.81e-05
2L_19426748_SNP CG13085 INTRON 1.85e-05
2L_19426748_SNP CG16771 INTRON 1.85e-05
2L_19426782_SNP CG16771 INTRON 1.85e-05
2L_19426782_SNP CG13085 INTRON 1.85e-05
X_14256077_SNP dpr8 INTRON 1.86e-05
2R_6398430_SNP lola INTRON 1.88e-05
X_10735231_INS sbr INTRON 1.88e-05
2L_19423677_SNP Pax INTRON 1.96e-05
2L_19423677_SNP CG16771 INTRON 1.96e-05
2L_19429239_SNP CG13085 INTRON 1.97e-05
2L_19429239_SNP CG16771 INTRON 1.97e-05
3L_22174657_SNP olf413 INTRON 2.06e-05
X_14256080_SNP dpr8 INTRON 2.23e-05
3R_22137592_SNP 2.27e-05
X_3382079_SNP CG10803 INTRON 2.27e-05
X_3382079_SNP CR44999 INTRON 2.27e-05
3L_2048836_SNP sls SYNONYMOUS_CODING 2.30e-05
2R_17564481_SNP CG30263 SYNONYMOUS_CODING 2.42e-05
3L_14421116_SNP bbg INTRON 2.44e-05
3R_18941021_SNP Rassf INTRON 2.59e-05
X_15413373_SNP Ac13E INTRON 2.62e-05
2L_19424626_SNP Pax INTRON 2.67e-05
2L_19424626_SNP CG16771 INTRON 2.67e-05
2L_12339554_SNP CG31862 DOWNSTREAM 2.71e-05
3R_6110171_SNP CG43143 INTRON 2.75e-05
2L_3243400_SNP 2.92e-05
2R_2894462_SNP Tsp42Ec INTRON 2.92e-05
2R_2894462_SNP CG30160 INTRON 2.92e-05
X_5754038_SNP 2.95e-05
3L_22144030_SNP olf413 INTRON 3.03e-05
3L_4318551_SNP Claspin DOWNSTREAM 3.04e-05
3L_4318551_SNP CG32250 DOWNSTREAM 3.04e-05
2R_18905268_SNP twi INTRON 3.06e-05
2R_18905268_SNP CG42741 INTRON 3.06e-05
2R_4548600_SNP ptc SYNONYMOUS_CODING 3.13e-05
3R_22504742_SNP beat-VII INTRON 3.15e-05
2R_10330590_SNP Oaz INTRON 3.18e-05
2R_10330596_MNP Oaz INTRON 3.18e-05
2R_10330600_INS Oaz INTRON 3.18e-05
3L_14339933_SNP fz INTRON 3.23e-05
2L_19426685_SNP CG13085 INTRON 3.39e-05
2L_19426685_SNP CG16771 INTRON 3.39e-05
3L_22305238_SNP Ten-m INTRON 3.43e-05
2R_10330606_SNP Oaz INTRON 3.44e-05
2L_15220353_SNP 3.48e-05
3L_16157384_SNP CG5151 UTR_5_PRIME 3.55e-05
2R_9958844_SNP Prosap INTRON 3.56e-05
X_5928662_SNP 3.58e-05
3L_1853640_SNP CG13936 INTRON 3.62e-05
3R_7950242_SNP CG4702 INTRON 3.67e-05
3L_14404836_SNP CG3919 NON_SYNONYMOUS_CODING 3.68e-05
2L_18754429_SNP 3.70e-05
3L_14152568_SNP 3.73e-05
2L_19429322_SNP CG13085 INTRON 3.78e-05
2L_19429322_SNP CG16771 INTRON 3.78e-05
2R_10330594_SNP Oaz INTRON 3.88e-05
3L_22646528_DEL CG33772 UPSTREAM 3.91e-05
2L_18754466_SNP 3.93e-05
3R_22805400_SNP CG14253 INTRON 3.97e-05
2L_18754162_SNP 4.09e-05
3L_16647994_SNP Baldspot INTRON 4.12e-05
3L_16647994_SNP snRNA:U12:73B INTRON 4.12e-05
3R_23411999_SNP raps UTR_3_PRIME 4.13e-05
3R_23411999_SNP CG5639 UTR_3_PRIME 4.13e-05
2L_12339589_SNP CG31862 DOWNSTREAM 4.51e-05
3L_1852858_SNP CG13936 INTRON 4.52e-05
2R_8432371_SNP fra INTRON 4.71e-05
2R_8432371_SNP CG33752 INTRON 4.71e-05
3L_4596471_DEL Src64B INTRON 4.74e-05
3R_14376982_SNP 4.74e-05
3R_12743496_SNP iab-8 INTRON 4.76e-05
X_15304333_SNP Cngl INTRON 4.89e-05
X_3382087_SNP CG10803 INTRON 4.91e-05
X_3382087_SNP CR44999 INTRON 4.91e-05
2L_18753704_SNP 4.92e-05
3R_22180208_SNP CG33970 INTRON 5.02e-05
2L_16076386_SNP beat-Ia INTRON 5.05e-05
2L_18758119_SNP 5.06e-05
3R_8087122_SNP svp INTRON 5.22e-05
3R_8087122_SNP CG44037 INTRON 5.22e-05
2L_18753902_SNP 5.28e-05
2L_12384172_SNP bru-2 INTRON 5.31e-05
3R_7950239_SNP CG4702 INTRON 5.40e-05
2L_8274876_DEL Btk29A INTRON 5.42e-05
X_3381344_SNP CR44999 INTRON 5.55e-05
X_3381344_SNP CG10803 INTRON 5.55e-05
X_3382189_SNP CG10803 SYNONYMOUS_CODING 5.67e-05
X_3382189_SNP CR44999 SYNONYMOUS_CODING 5.67e-05
2L_19425002_SNP Pax INTRON 5.85e-05
2L_19425002_SNP CG16771 INTRON 5.85e-05
3L_22152549_DEL olf413 INTRON 5.86e-05
3L_14152551_SNP 5.93e-05
2L_15220356_SNP 5.99e-05
2L_19422021_SNP Pax INTRON 6.08e-05
3R_8103955_SNP svp INTRON 6.10e-05
3R_19830988_DEL KrT95D INTRON 6.28e-05
2L_19416856_SNP Pax INTRON 6.50e-05
2L_19416856_SNP Lectin-galC1 INTRON 6.50e-05
3R_24089238_SNP CG43125 NON_SYNONYMOUS_CODING 6.51e-05
3R_24089238_SNP CG43124 NON_SYNONYMOUS_CODING 6.51e-05
X_13014365_SNP CG42237 INTRON 6.67e-05
3L_9575411_SNP CG42673 INTRON 6.69e-05
3R_20196586_SNP CG17782 NON_SYNONYMOUS_CODING 6.84e-05
3R_20196586_SNP CG13614 NON_SYNONYMOUS_CODING 6.84e-05
2R_3514811_SNP CG43340 INTRON 6.88e-05
2L_19429387_SNP CG13085 INTRON 6.91e-05
2L_19429387_SNP CG16771 INTRON 6.91e-05
2L_6742211_SNP CG11221 UPSTREAM 7.01e-05
X_9642410_SNP Sp1 INTRON 7.15e-05
X_731454_SNP CG43867 INTRON 7.22e-05
2R_17565035_SNP CG30263 SYNONYMOUS_CODING 7.24e-05
3L_19857214_SNP 7.27e-05
3L_14412291_SNP bbg INTRON 7.36e-05
3L_3050532_SNP CG32485 UTR_5_PRIME 7.37e-05
3L_3050532_SNP Sk2 UTR_5_PRIME 7.37e-05
3L_5608245_SNP 7.42e-05
3L_843314_SNP Gr61a INTRON 7.42e-05
3L_843314_SNP CG13889 INTRON 7.42e-05
X_3381915_SNP CG10803 SYNONYMOUS_CODING 7.57e-05
X_3381915_SNP CR44999 SYNONYMOUS_CODING 7.57e-05
2R_17584882_SNP HmgZ DOWNSTREAM 7.74e-05
2R_17584882_SNP CngB DOWNSTREAM 7.74e-05
X_5671081_SNP CG42699 INTRON 7.76e-05
X_5671081_SNP CG3108 INTRON 7.76e-05
2L_12339479_SNP CG31862 DOWNSTREAM 7.87e-05
2L_6742224_DEL CG11221 UPSTREAM 7.95e-05
2L_6742213_DEL CG11221 UPSTREAM 8.21e-05
3R_16565056_SNP CG17267 UPSTREAM 8.26e-05
3R_16565056_SNP CG42322 UPSTREAM 8.26e-05
3L_8918810_SNP Tsp66E INTRON 8.27e-05
3L_16156405_SNP CG5151 INTRON 8.30e-05
2R_10330586_SNP Oaz INTRON 8.31e-05
2L_14915314_SNP CG42313 INTRON 8.33e-05
3R_22504708_SNP beat-VII INTRON 8.34e-05
3L_6589428_SNP ndl NON_SYNONYMOUS_CODING 8.41e-05
3L_10498413_SNP A2bp1 INTRON 8.48e-05
3L_10498416_MNP A2bp1 INTRON 8.48e-05
3L_8624605_SNP Zasp66 INTRON 8.54e-05
3L_8624605_SNP Cdc6 INTRON 8.54e-05
2R_17588521_MNP HmgZ INTRON 8.63e-05
2R_17588521_MNP HmgD INTRON 8.63e-05
2R_7460403_SNP 8.63e-05
3L_920622_SNP Glut1 INTRON 8.69e-05
2L_15220342_INS 8.70e-05
X_7994327_SNP CG2258 INTRON 8.71e-05
3L_9061593_SNP CG4911 UTR_3_PRIME 8.76e-05
3R_24785872_SNP CG14521 INTRON 8.77e-05
X_8790818_SNP Moe INTRON 8.79e-05
X_8790829_SNP Moe INTRON 8.79e-05
2R_6417213_SNP lola INTRON 8.84e-05
3L_19200340_SNP fz2 INTRON 8.85e-05
X_3382150_SNP CR44999 INTRON 8.86e-05
X_3382150_SNP CG10803 INTRON 8.86e-05
3L_14691172_SNP CG17177 NON_SYNONYMOUS_CODING 8.94e-05
3L_14691172_SNP ome NON_SYNONYMOUS_CODING 8.94e-05
3L_2402512_SNP CG45186 INTRON 9.00e-05
2R_17082950_SNP Lapsyn INTRON 9.03e-05
3R_8110301_SNP svp INTRON 9.11e-05
3R_17167115_SNP CG16791 INTRON 9.12e-05
X_7994276_SNP CG2258 INTRON 9.26e-05
2R_10344322_SNP Oaz INTRON 9.29e-05
2R_6426324_SNP lola INTRON 9.38e-05
2R_6419048_SNP lola DOWNSTREAM 9.42e-05
2L_2552957_SNP CG3515 UPSTREAM 9.43e-05
X_7994535_SNP CG2258 INTRON 9.46e-05
2R_10615404_SNP 9.56e-05
2L_12339547_SNP CG31862 DOWNSTREAM 9.60e-05
3R_27479386_SNP kek6 INTRON 9.97e-05

5.3.2 Group count

grps n
INTRON 168
SYNONYMOUS_CODING 13
DOWNSTREAM 12
NON_SYNONYMOUS_CODING 8
UPSTREAM 7
UTR_3_PRIME 4
UTR_5_PRIME 3

5.3.3 Gene counts

gene n
Oaz 23
CG16771 14
CG10803 12
CR44999 12
CG13085 11
CG31862 7
lola 6
Pax 5
olf413 4
bbg 3
beat-VII 3
bru-2 3
CG11221 3
CG13936 3
CG2258 3
CG30263 3
dpr8 3
sbr 3
svp 3
A2bp1 2
CG15209 2
CG34127 2
CG42673 2
CG4702 2
CG5151 2
Grip 2
HmgZ 2
iab-8 2
Moe 2
twin 2
Ac13E 1
Baldspot 1
beat-Ia 1
Btk29A 1
Cdc6 1
CG10237 1
CG13614 1
CG13889 1
CG14253 1
CG14521 1
CG16791 1
CG17177 1
CG17267 1
CG17782 1
CG30160 1
CG3108 1
CG32082 1
CG32250 1
CG32485 1
CG33752 1
CG33772 1
CG33970 1
CG3515 1
CG3919 1
CG42237 1
CG42313 1
CG42322 1
CG42699 1
CG42741 1
CG43124 1
CG43125 1
CG43143 1
CG43340 1
CG43867 1
CG44037 1
CG45186 1
CG4911 1
CG5639 1
Claspin 1
CngB 1
Cngl 1
disco-r 1
fra 1
fz 1
fz2 1
Glut1 1
Gr61a 1
HmgD 1
Ipod 1
kek6 1
KrT95D 1
Lapsyn 1
Lectin-galC1 1
ndl 1
ome 1
Prosap 1
ptc 1
raps 1
Rassf 1
Sk2 1
sls 1
snRNA:U12:73B 1
Sp1 1
Src64B 1
Ten-m 1
Tsp42Ec 1
Tsp66E 1
twi 1
Zasp66 1

5.4 CTmin

5.4.1 All hits

ID gene grps AvgMixedPval
2R_20313579_SNP prom INTRON 0.00e+00
2R_20313579_SNP CG42383 INTRON 0.00e+00
X_4385442_SNP CR32773 INTRON 1.00e-07
3R_13900959_SNP 2.00e-07
2R_20308502_SNP prom INTRON 4.00e-07
3R_12992895_SNP Mur89F INTRON 7.00e-07
2R_20313917_SNP prom INTRON 9.00e-07
2R_20313922_DEL prom INTRON 9.00e-07
2R_20313930_SNP prom INTRON 9.00e-07
2R_20313933_SNP prom INTRON 9.00e-07
2R_20313935_INS prom INTRON 9.00e-07
2R_20313938_SNP prom INTRON 9.00e-07
2R_20313940_MNP prom INTRON 9.00e-07
2R_20308558_SNP prom INTRON 1.00e-06
2R_20250118_SNP bs INTRON 1.00e-06
2R_20250118_SNP CR44811 INTRON 1.00e-06
2R_20301097_SNP CG45068 SYNONYMOUS_CODING 1.10e-06
2R_20301097_SNP CG45069 SYNONYMOUS_CODING 1.10e-06
2R_20301239_SNP CG45068 NON_SYNONYMOUS_CODING 1.10e-06
2R_20301239_SNP CG45069 NON_SYNONYMOUS_CODING 1.10e-06
2R_20308533_SNP prom INTRON 1.20e-06
2R_20313914_SNP prom INTRON 1.30e-06
2L_2612712_SNP 1.40e-06
2R_20313927_SNP prom INTRON 1.50e-06
2R_20313911_SNP prom INTRON 1.80e-06
2R_20307893_SNP prom NON_SYNONYMOUS_CODING 1.80e-06
2R_20313916_SNP prom INTRON 1.90e-06
2R_20308565_SNP prom INTRON 1.90e-06
2R_20309964_SNP prom INTRON 2.00e-06
2R_20309106_SNP prom INTRON 2.20e-06
3R_11364111_SNP CG18519 SYNONYMOUS_CODING 2.20e-06
2R_20313919_SNP prom INTRON 2.40e-06
3R_14850882_SNP CG14285 NON_SYNONYMOUS_CODING 3.10e-06
3R_14850882_SNP CG14286 NON_SYNONYMOUS_CODING 3.10e-06
2R_20313912_SNP prom INTRON 3.20e-06
2L_3465546_SNP msl-2 NON_SYNONYMOUS_CODING 3.20e-06
2L_3465546_SNP Pdsw NON_SYNONYMOUS_CODING 3.20e-06
2R_20301123_SNP CG45069 UTR_5_PRIME 3.30e-06
2R_20301123_SNP CG45068 UTR_5_PRIME 3.30e-06
3R_13552400_SNP Lgr1 INTRON 3.60e-06
3R_11367299_SNP CG18519 NON_SYNONYMOUS_CODING 4.00e-06
3R_11288771_SNP AdamTS-A INTRON 4.20e-06
2R_20301091_SNP CG45069 UTR_5_PRIME 4.20e-06
2R_20301091_SNP CG45068 UTR_5_PRIME 4.20e-06
2R_12301745_SNP Sema-2b INTRON 4.20e-06
2R_12301745_SNP Menl-2 INTRON 4.20e-06
3R_12990694_SNP Mur89F INTRON 4.30e-06
2R_20309307_SNP prom INTRON 4.80e-06
3R_9949217_SNP twf SYNONYMOUS_CODING 5.60e-06
3R_9949217_SNP 140up SYNONYMOUS_CODING 5.60e-06
3R_13002842_SNP Mur89F INTRON 5.70e-06
2R_20309122_SNP prom INTRON 5.80e-06
3R_12997215_SNP Mur89F INTRON 6.00e-06
2L_3396579_SNP CR44792 DOWNSTREAM 6.60e-06
2L_3396577_SNP CR44792 DOWNSTREAM 6.70e-06
3R_13552010_SNP Lgr1 INTRON 6.70e-06
3L_4694662_SNP CG15876 SYNONYMOUS_CODING 7.50e-06
3L_4694662_SNP RhoGEF64C SYNONYMOUS_CODING 7.50e-06
X_5639729_SNP IntS6 INTRON 7.50e-06
2L_2612282_INS CG15395 DOWNSTREAM 7.60e-06
2R_7024700_SNP BBS4 SYNONYMOUS_CODING 7.80e-06
2R_20313809_SNP prom INTRON 9.00e-06
3L_5853164_SNP 9.60e-06
2L_3885863_SNP capu INTRON 9.70e-06
2R_20263633_SNP bs UTR_3_PRIME 1.07e-05
3L_8696154_SNP 1.07e-05
2R_20308557_SNP prom INTRON 1.08e-05
2R_20313929_SNP prom INTRON 1.11e-05
2L_14847936_SNP CG15279 INTRON 1.17e-05
X_4385623_SNP CR32773 INTRON 1.19e-05
3R_11388164_SNP 1.22e-05
2R_15691303_SNP 1.23e-05
2R_20314643_SNP prom INTRON 1.26e-05
3L_14188075_SNP nuf INTRON 1.30e-05
2R_20250001_SNP bs INTRON 1.37e-05
2R_20250001_SNP CR44811 INTRON 1.37e-05
2R_10963282_SNP 1.40e-05
X_12403029_SNP CG2556 INTRON 1.43e-05
2R_3769346_SNP Dgk UTR_5_PRIME 1.45e-05
3R_5901971_SNP CG5361 UPSTREAM 1.48e-05
2L_18774061_SNP ham INTRON 1.49e-05
2L_18774061_SNP CR43804 INTRON 1.49e-05
2R_20308551_SNP prom INTRON 1.51e-05
2R_20306042_SNP prom INTRON 1.52e-05
2R_17037739_INS CG30389 INTRON 1.55e-05
X_14518598_SNP NetA INTRON 1.55e-05
X_6270410_SNP 1.55e-05
3R_12435590_SNP NPF INTRON 1.58e-05
3R_12992188_SNP Mur89F INTRON 1.61e-05
3L_7002933_SNP Mp INTRON 1.80e-05
2R_20280640_SNP slik DOWNSTREAM 1.81e-05
X_14991195_SNP Rab3-GEF INTRON 1.83e-05
3R_12571587_SNP bxd EXON 1.85e-05
3R_9755267_SNP 1.85e-05
X_14994016_SNP Rab3-GEF SYNONYMOUS_CODING 1.85e-05
3R_12997318_SNP Mur89F INTRON 2.01e-05
2R_20263506_SNP bs NON_SYNONYMOUS_CODING 2.02e-05
2R_20263738_SNP bs UTR_3_PRIME 2.02e-05
2R_20263740_INS bs UTR_3_PRIME 2.02e-05
2R_20263742_SNP bs UTR_3_PRIME 2.02e-05
2L_14861293_SNP 2.04e-05
2R_12971842_SNP CG30460 INTRON 2.08e-05
2R_3772050_SNP Dgk INTRON 2.10e-05
3R_11382934_SNP 2.12e-05
2R_20233630_SNP bs INTRON 2.14e-05
X_4385497_SNP CR32773 INTRON 2.14e-05
2R_20304475_SNP prom DOWNSTREAM 2.18e-05
2R_20313932_SNP prom INTRON 2.19e-05
3R_11367274_SNP CG18519 SYNONYMOUS_CODING 2.22e-05
3R_11367340_SNP CG18519 SYNONYMOUS_CODING 2.22e-05
3R_11367346_SNP CG18519 SYNONYMOUS_CODING 2.22e-05
3R_11423065_SNP 2.25e-05
2R_20257701_SNP bs INTRON 2.30e-05
2R_20257701_SNP CR44811 INTRON 2.30e-05
2R_20303569_SNP prom INTRON 2.30e-05
2R_20303569_SNP CG45068 INTRON 2.30e-05
2L_14829539_SNP 2.36e-05
2R_20252998_SNP CR44811 INTRON 2.36e-05
2R_20252998_SNP bs INTRON 2.36e-05
2L_16629322_SNP CG42389 INTRON 2.42e-05
2L_16629322_SNP CR44151 INTRON 2.42e-05
2R_20280846_SNP slik DOWNSTREAM 2.43e-05
X_9640945_SNP Sp1 INTRON 2.43e-05
3R_9755266_SNP 2.54e-05
2R_17103833_SNP CG15661 SYNONYMOUS_CODING 2.55e-05
3R_12041136_SNP CR45641 DOWNSTREAM 2.58e-05
X_5908964_SNP CR44499 DOWNSTREAM 2.58e-05
2R_20308522_SNP prom INTRON 2.69e-05
2R_20257613_SNP bs INTRON 2.70e-05
2R_20257613_SNP CR44811 INTRON 2.70e-05
3R_5905483_SNP 2.70e-05
3R_19770578_SNP CG12268 INTRON 2.74e-05
3R_19770583_SNP CG12268 INTRON 2.74e-05
3R_19770588_SNP CG12268 INTRON 2.74e-05
3R_12996262_SNP Mur89F INTRON 2.82e-05
3R_4247244_SNP CG45263 INTRON 2.83e-05
3R_4247244_SNP Obp85a INTRON 2.83e-05
3R_9755188_SNP 2.85e-05
2L_1964167_SNP erm INTRON 2.87e-05
3L_3637779_SNP dar1 INTRON 2.88e-05
3R_11422476_INS 2.88e-05
2R_6825968_SNP Spn47C UTR_3_PRIME 2.89e-05
2R_20280809_SNP slik DOWNSTREAM 2.96e-05
3R_9949202_SNP twf SYNONYMOUS_CODING 2.97e-05
3R_9949202_SNP 140up SYNONYMOUS_CODING 2.97e-05
3R_12992004_SNP Mur89F INTRON 2.98e-05
3R_12991699_SNP Mur89F INTRON 3.03e-05
X_7604829_INS 3.04e-05
3L_2010684_SNP CR44535 EXON 3.13e-05
2L_14781915_SNP CR15280 EXON 3.24e-05
2R_20313730_SNP prom INTRON 3.24e-05
3R_13524790_SNP osa INTRON 3.26e-05
2R_20260408_SNP bs INTRON 3.32e-05
2R_20306197_SNP prom SYNONYMOUS_CODING 3.34e-05
2R_12696827_SNP 3.35e-05
3R_5285535_SNP GstZ2 INTRON 3.36e-05
X_14993421_SNP Rab3-GEF INTRON 3.38e-05
X_9662105_SNP 3.43e-05
2R_14565483_DEL CG44434 DOWNSTREAM 3.45e-05
2R_14565483_DEL CG44435 DOWNSTREAM 3.45e-05
2R_20296526_SNP SerT SYNONYMOUS_CODING 3.51e-05
3R_11400768_SNP 3.51e-05
3R_12992053_DEL Mur89F INTRON 3.53e-05
3R_11363907_SNP CG18519 SYNONYMOUS_CODING 3.58e-05
3R_11363907_SNP CG18522 SYNONYMOUS_CODING 3.58e-05
2L_1090401_SNP CG4629 INTRON 3.60e-05
2R_1991490_SNP EcR INTRON 3.60e-05
2R_1991491_SNP EcR INTRON 3.60e-05
3R_12023256_SNP sra UTR_3_PRIME 3.72e-05
3R_12023256_SNP CG6126 UTR_3_PRIME 3.72e-05
3R_17772582_SNP 3.73e-05
2R_17983519_SNP CG11073 INTRON 3.78e-05
2R_20269748_SNP mAChR-A INTRON 3.81e-05
2L_5945189_SNP Gpdh INTRON 3.86e-05
3L_3812775_SNP CG12006 SYNONYMOUS_CODING 3.86e-05
2L_14829550_SNP 3.88e-05
2L_14861303_SNP 3.90e-05
3L_12306383_SNP 3.90e-05
2R_10963284_SNP 3.96e-05
3L_4254140_SNP ago UPSTREAM 3.98e-05
3L_4254140_SNP CG1265 UPSTREAM 3.98e-05
2L_5613850_SNP CG14010 INTRON 4.01e-05
2L_2601212_SNP CR44789 EXON 4.04e-05
2R_20258747_SNP bs INTRON 4.07e-05
3R_11405546_SNP 4.24e-05
3R_11411525_SNP 4.28e-05
3R_11425747_SNP 4.31e-05
X_18167335_SNP 4.40e-05
2L_14849951_SNP CG15279 INTRON 4.44e-05
2R_12704274_SNP CG5550 SYNONYMOUS_CODING 4.44e-05
2R_12704274_SNP CR43417 SYNONYMOUS_CODING 4.44e-05
3L_4694906_SNP RhoGEF64C INTRON 4.44e-05
3L_4694906_SNP CG15876 INTRON 4.44e-05
2R_1618770_SNP 4.47e-05
2R_20306103_SNP prom INTRON 4.48e-05
3R_12996121_SNP Mur89F INTRON 4.64e-05
X_12899932_SNP rad INTRON 4.64e-05
3R_9755209_INS 4.69e-05
X_14994013_SNP Rab3-GEF SYNONYMOUS_CODING 4.71e-05
X_14994019_SNP Rab3-GEF SYNONYMOUS_CODING 4.71e-05
3R_13928920_SNP sr INTRON 4.73e-05
3L_997191_SNP trio DOWNSTREAM 4.76e-05
3L_4254108_SNP ago INTRON 4.78e-05
3L_4254108_SNP CG1265 INTRON 4.78e-05
3R_11420351_SNP 4.82e-05
3R_11420344_SNP 4.83e-05
2L_5964548_SNP psd INTRON 4.87e-05
2L_5964548_SNP CG13992 INTRON 4.87e-05
3R_9755183_INS 4.87e-05
3R_12996202_SNP Mur89F INTRON 4.91e-05
2R_12628367_SNP 4.92e-05
3L_3812970_SNP CG12006 SYNONYMOUS_CODING 4.94e-05
X_18251508_DEL 4.94e-05
X_3945990_SNP 5.00e-05
2R_20257397_SNP bs INTRON 5.01e-05
2R_20257397_SNP CR44811 INTRON 5.01e-05
2L_14839600_SNP CR43805 DOWNSTREAM 5.07e-05
2R_5227902_SNP CG13954 INTRON 5.08e-05
2R_5227902_SNP CG13739 INTRON 5.08e-05
3R_12992010_SNP Mur89F INTRON 5.11e-05
3R_12996231_DEL Mur89F INTRON 5.17e-05
3R_19565063_SNP Hmgcr INTRON 5.18e-05
4_212564_SNP CG2316 INTRON 5.18e-05
3R_10974341_SNP 5.24e-05
2L_8257947_SNP Btk29A DOWNSTREAM 5.27e-05
2L_8257947_SNP CG8086 DOWNSTREAM 5.27e-05
3R_9755264_SNP 5.32e-05
3R_11384632_SNP 5.36e-05
3L_12833443_SNP CG10960 INTRON 5.37e-05
X_18915078_SNP CG43759 INTRON 5.38e-05
2L_3013371_SNP CG17265 INTRON 5.49e-05
3L_16500200_SNP CG43373 INTRON 5.52e-05
2R_20276477_SNP mAChR-A INTRON 5.61e-05
3L_8207415_SNP CG8006 DOWNSTREAM 5.61e-05
3L_8207415_SNP CG8012 DOWNSTREAM 5.61e-05
2R_9189361_DEL CG17047 DOWNSTREAM 5.62e-05
X_14993547_SNP Rab3-GEF INTRON 5.63e-05
2L_5867252_SNP rau INTRON 5.64e-05
2L_1430353_SNP 5.65e-05
2R_20298783_SNP SerT UPSTREAM 5.67e-05
2R_20298783_SNP CG45068 UPSTREAM 5.67e-05
2R_20301145_SNP CG45068 SYNONYMOUS_CODING 5.70e-05
2R_20301145_SNP CG45069 SYNONYMOUS_CODING 5.70e-05
2R_3551128_SNP CG2065 UPSTREAM 5.71e-05
2R_3551128_SNP CG2070 UPSTREAM 5.71e-05
3L_11835004_SNP 5.72e-05
X_6297829_SNP 5.74e-05
2L_14839047_SNP 5.78e-05
2L_14839838_SNP CR43805 DOWNSTREAM 5.78e-05
2R_17118453_SNP ASPP INTRON 5.88e-05
2R_20263548_SNP bs UTR_3_PRIME 5.91e-05
3R_11405178_SNP 5.92e-05
3R_12989857_SNP Mur89F INTRON 5.92e-05
X_18167373_DEL 5.92e-05
2L_14839629_INS CR43805 DOWNSTREAM 5.96e-05
2R_20300858_SNP CG45068 SYNONYMOUS_CODING 5.98e-05
2R_20300858_SNP CG45069 SYNONYMOUS_CODING 5.98e-05
3R_13900852_SNP 6.03e-05
3R_13900177_SNP 6.08e-05
X_18251504_SNP 6.09e-05
X_18251505_SNP 6.09e-05
3R_11420325_SNP 6.24e-05
3L_4254603_DEL CG1265 UPSTREAM 6.26e-05
3L_4254603_DEL ago UPSTREAM 6.26e-05
2R_9926382_SNP mam SYNONYMOUS_CODING 6.31e-05
3R_11420346_SNP 6.32e-05
3R_11402243_SNP 6.37e-05
3R_12996042_SNP Mur89F INTRON 6.39e-05
2R_17798495_SNP Fili INTRON 6.40e-05
2L_14840839_SNP CR43805 DOWNSTREAM 6.45e-05
3R_11425064_SNP 6.45e-05
2R_12628349_SNP 6.46e-05
2R_16139285_SNP CG9864 INTRON 6.51e-05
2R_20258970_SNP bs INTRON 6.51e-05
3R_11420330_SNP 6.52e-05
3R_11422667_SNP 6.52e-05
2R_12009356_SNP Jhe NON_SYNONYMOUS_CODING 6.54e-05
X_7588127_SNP CHES-1-like INTRON 6.66e-05
3R_5724642_SNP Glut4EF INTRON 6.72e-05
3R_24617170_SNP intr UTR_3_PRIME 6.75e-05
3R_24617170_SNP CG34295 UTR_3_PRIME 6.75e-05
3R_19770553_SNP CG12268 INTRON 6.76e-05
2R_19373351_SNP CG43795 INTRON 6.81e-05
3R_12988032_SNP Mur89F INTRON 6.82e-05
3R_11367310_SNP CG18519 NON_SYNONYMOUS_CODING 6.84e-05
X_18252257_DEL CG6106 UPSTREAM 6.92e-05
3L_4671269_SNP axo INTRON 7.01e-05
2R_10962869_SNP 7.03e-05
3R_12996058_SNP Mur89F INTRON 7.07e-05
2R_3772313_SNP Dgk INTRON 7.10e-05
3L_13383636_SNP Poc1 UPSTREAM 7.10e-05
2R_18750111_SNP 7.21e-05
X_18252738_DEL CG6106 UPSTREAM 7.21e-05
X_18252748_SNP CG6106 UPSTREAM 7.21e-05
2L_14847382_SNP CG15279 INTRON 7.26e-05
2R_6825911_SNP Spn47C DOWNSTREAM 7.26e-05
3R_11420431_DEL 7.26e-05
2R_9208823_SNP 7.29e-05
X_5631703_INS CG32758 UTR_5_PRIME 7.32e-05
X_5631703_INS IntS6 UTR_5_PRIME 7.32e-05
2L_14840782_SNP CR43805 DOWNSTREAM 7.33e-05
2L_14840900_SNP CR43805 DOWNSTREAM 7.33e-05
3R_11347985_SNP 7.35e-05
3R_11355047_SNP CG31296 DOWNSTREAM 7.36e-05
X_16295460_SNP CG9981 SYNONYMOUS_CODING 7.45e-05
X_18167332_SNP 7.47e-05
2L_1264510_SNP robo3 INTRON 7.48e-05
2R_13598343_SNP CG6424 INTRON 7.51e-05
2L_20784197_SNP 7.52e-05
3R_9755191_SNP 7.56e-05
3R_9755213_SNP 7.60e-05
2R_20253495_SNP CR44811 INTRON 7.63e-05
2R_20253495_SNP bs INTRON 7.63e-05
3R_11367384_SNP CG18519 NON_SYNONYMOUS_CODING 7.63e-05
2L_1611896_SNP CG14352 INTRON 7.65e-05
2L_1611896_SNP RFeSP INTRON 7.65e-05
X_12346699_SNP Pkcdelta INTRON 7.65e-05
2R_19373299_SNP CG43795 INTRON 7.69e-05
2L_14850088_SNP CG15279 INTRON 7.76e-05
3R_12959441_SNP CG31266 UTR_3_PRIME 7.84e-05
3R_12959441_SNP CG31267 UTR_3_PRIME 7.84e-05
3R_12998775_SNP Mur89F INTRON 7.88e-05
3R_11420305_SNP 7.93e-05
2R_20305957_SNP prom INTRON 7.95e-05
2L_5942852_SNP Sfp26Ad SYNONYMOUS_CODING 7.99e-05
2L_5942852_SNP CR45289 SYNONYMOUS_CODING 7.99e-05
3L_18019988_SNP Eip75B INTRON 8.11e-05
3L_9933694_SNP CG34356 INTRON 8.16e-05
2R_12628403_SNP 8.20e-05
3R_9755255_SNP 8.20e-05
X_3945994_SNP 8.25e-05
3R_6961146_SNP 8.26e-05
2R_10221274_SNP Shroom INTRON 8.41e-05
3R_12733232_SNP iab-8 INTRON 8.42e-05
3R_12733233_SNP iab-8 INTRON 8.42e-05
3R_12733519_SNP iab-8 INTRON 8.42e-05
3R_11420324_SNP 8.45e-05
2R_20275800_SNP mAChR-A INTRON 8.46e-05
3R_14277461_SNP fru INTRON 8.46e-05
2L_14861260_SNP 8.49e-05
X_3256422_SNP 8.50e-05
X_3256427_SNP 8.50e-05
3L_7607016_SNP CG33275 INTRON 8.52e-05
3L_9760566_SNP CG8177 INTRON 8.56e-05
2R_16825523_SNP Rx DOWNSTREAM 8.57e-05
3L_9933685_SNP CG34356 INTRON 8.58e-05
3R_11424706_SNP 8.60e-05
2R_3772109_INS Dgk INTRON 8.63e-05
3R_12317718_SNP Cad89D SYNONYMOUS_CODING 8.63e-05
2R_20261326_SNP bs INTRON 8.69e-05
2R_20261326_SNP tRNA:N5:60C INTRON 8.69e-05
3R_11387717_SNP 8.69e-05
X_14991448_SNP Rab3-GEF INTRON 8.80e-05
2R_20284940_SNP slik SYNONYMOUS_CODING 8.82e-05
2R_20260586_SNP bs INTRON 8.86e-05
2R_20260586_SNP tRNA:N5:60C INTRON 8.86e-05
X_14993353_SNP Rab3-GEF INTRON 8.87e-05
3L_14972722_INS CG3349 UTR_5_PRIME 8.90e-05
3R_12996167_SNP Mur89F INTRON 8.94e-05
3R_14287775_SNP fru INTRON 8.94e-05
3R_11388712_SNP 8.96e-05
2L_2782146_INS Syt1 UTR_3_PRIME 8.98e-05
X_14991551_SNP Rab3-GEF SYNONYMOUS_CODING 9.04e-05
3L_15704758_SNP 9.07e-05
2L_17027312_SNP 9.09e-05
2L_4353069_SNP CG15429 SYNONYMOUS_CODING 9.11e-05
3R_11292329_SNP AdamTS-A INTRON 9.16e-05
2R_12559097_DEL CG34457 UTR_3_PRIME 9.18e-05
2R_12559097_DEL CG34458 UTR_3_PRIME 9.18e-05
2R_20276009_SNP mAChR-A INTRON 9.18e-05
2L_14858849_SNP 9.20e-05
2R_20264927_SNP CG13578 UPSTREAM 9.20e-05
2R_20264927_SNP bs UPSTREAM 9.20e-05
3L_12404345_SNP CG32103 INTRON 9.20e-05
3R_12989856_SNP Mur89F INTRON 9.22e-05
X_19504387_DEL CG14207 INTRON 9.33e-05
2R_10218531_SNP Shroom INTRON 9.35e-05
2L_8325829_SNP CG7781 UPSTREAM 9.38e-05
3L_17618385_SNP CG7510 INTRON 9.38e-05
3R_13332029_SNP Dscam3 UPSTREAM 9.38e-05
2R_3546887_SNP CG1339 SYNONYMOUS_CODING 9.40e-05
2R_3546887_SNP CG30495 SYNONYMOUS_CODING 9.40e-05
2R_16938611_SNP shg SYNONYMOUS_CODING 9.41e-05
3R_12992033_SNP Mur89F INTRON 9.45e-05
2L_9735509_SNP Nckx30C INTRON 9.47e-05
X_14991393_DEL Rab3-GEF INTRON 9.47e-05
3R_11379202_SNP CG18516 UPSTREAM 9.48e-05
2R_20277886_SNP mAChR-A UPSTREAM 9.51e-05
2R_20277886_SNP CR44813 UPSTREAM 9.51e-05
3R_11400817_SNP 9.64e-05
2L_14839669_SNP CR43805 DOWNSTREAM 9.70e-05
3R_11402209_SNP 9.76e-05
3R_12996226_SNP Mur89F INTRON 9.79e-05
3R_12396134_SNP CG42342 INTRON 9.90e-05
3L_3684685_DEL 9.93e-05
2L_21033767_SNP CG42238 INTRON 9.98e-05
2R_8722614_SNP 9.99e-05

5.4.2 Group count

grps n
INTRON 185
SYNONYMOUS_CODING 40
DOWNSTREAM 27
UPSTREAM 20
UTR_3_PRIME 15
NON_SYNONYMOUS_CODING 12
UTR_5_PRIME 8
EXON 4

5.4.3 Gene counts

gene n
prom 37
Mur89F 23
bs 20
Rab3-GEF 10
CG18519 8
CG45068 8
CR43805 7
CR44811 7
CG45069 6
mAChR-A 5
CG12268 4
CG15279 4
Dgk 4
slik 4
ago 3
CG1265 3
CG6106 3
CR32773 3
iab-8 3
140up 2
AdamTS-A 2
CG12006 2
CG15876 2
CG34356 2
CG43795 2
CR44792 2
EcR 2
fru 2
IntS6 2
Lgr1 2
RhoGEF64C 2
SerT 2
Shroom 2
Spn47C 2
tRNA:N5:60C 2
twf 2
ASPP 1
axo 1
BBS4 1
Btk29A 1
bxd 1
Cad89D 1
capu 1
CG10960 1
CG11073 1
CG1339 1
CG13578 1
CG13739 1
CG13954 1
CG13992 1
CG14010 1
CG14207 1
CG14285 1
CG14286 1
CG14352 1
CG15395 1
CG15429 1
CG15661 1
CG17047 1
CG17265 1
CG18516 1
CG18522 1
CG2065 1
CG2070 1
CG2316 1
CG2556 1
CG30389 1
CG30460 1
CG30495 1
CG31266 1
CG31267 1
CG31296 1
CG32103 1
CG32758 1
CG33275 1
CG3349 1
CG34295 1
CG34457 1
CG34458 1
CG42238 1
CG42342 1
CG42383 1
CG42389 1
CG43373 1
CG43759 1
CG44434 1
CG44435 1
CG45263 1
CG4629 1
CG5361 1
CG5550 1
CG6126 1
CG6424 1
CG7510 1
CG7781 1
CG8006 1
CG8012 1
CG8086 1
CG8177 1
CG9864 1
CG9981 1
CHES-1-like 1
CR15280 1
CR43417 1
CR43804 1
CR44151 1
CR44499 1
CR44535 1
CR44789 1
CR44813 1
CR45289 1
CR45641 1
dar1 1
Dscam3 1
Eip75B 1
erm 1
Fili 1
Glut4EF 1
Gpdh 1
GstZ2 1
ham 1
Hmgcr 1
intr 1
Jhe 1
mam 1
Menl-2 1
Mp 1
msl-2 1
Nckx30C 1
NetA 1
NPF 1
nuf 1
Obp85a 1
osa 1
Pdsw 1
Pkcdelta 1
Poc1 1
psd 1
rad 1
rau 1
RFeSP 1
robo3 1
Rx 1
Sema-2b 1
Sfp26Ad 1
shg 1
Sp1 1
sr 1
sra 1
Syt1 1
trio 1

5.5 Thermal Breadth

5.5.1 All hits

ID gene grps AvgMixedPval
3R_12992895_SNP Mur89F INTRON 1.00e-07
2R_20313579_SNP prom INTRON 6.00e-07
2R_20313579_SNP CG42383 INTRON 6.00e-07
2R_7024700_SNP BBS4 SYNONYMOUS_CODING 8.00e-07
3R_13900959_SNP 1.30e-06
2R_20301097_SNP CG45068 SYNONYMOUS_CODING 1.40e-06
2R_20301097_SNP CG45069 SYNONYMOUS_CODING 1.40e-06
2R_20301239_SNP CG45068 NON_SYNONYMOUS_CODING 1.40e-06
2R_20301239_SNP CG45069 NON_SYNONYMOUS_CODING 1.40e-06
2L_2612712_SNP 1.90e-06
3R_13552010_SNP Lgr1 INTRON 3.00e-06
2R_20301123_SNP CG45069 UTR_5_PRIME 3.30e-06
2R_20301123_SNP CG45068 UTR_5_PRIME 3.30e-06
2R_20301091_SNP CG45069 UTR_5_PRIME 3.40e-06
2R_20301091_SNP CG45068 UTR_5_PRIME 3.40e-06
3R_5905483_SNP 3.60e-06
X_4385442_SNP CR32773 INTRON 4.30e-06
3R_13552400_SNP Lgr1 INTRON 4.50e-06
2L_20784197_SNP 5.60e-06
2L_3465546_SNP msl-2 NON_SYNONYMOUS_CODING 5.70e-06
2L_3465546_SNP Pdsw NON_SYNONYMOUS_CODING 5.70e-06
3R_12991699_SNP Mur89F INTRON 6.10e-06
3R_12990694_SNP Mur89F INTRON 6.30e-06
3L_997191_SNP trio DOWNSTREAM 6.60e-06
3R_4488005_SNP p SYNONYMOUS_CODING 7.30e-06
3R_5901971_SNP CG5361 UPSTREAM 7.30e-06
X_18252257_DEL CG6106 UPSTREAM 8.10e-06
2R_20250118_SNP bs INTRON 9.40e-06
2R_20250118_SNP CR44811 INTRON 9.40e-06
X_5639729_SNP IntS6 INTRON 9.60e-06
3L_7002933_SNP Mp INTRON 1.01e-05
2R_17983519_SNP CG11073 INTRON 1.10e-05
3R_4487071_SNP p NON_SYNONYMOUS_CODING 1.11e-05
3R_4487071_SNP bel NON_SYNONYMOUS_CODING 1.11e-05
2R_14565483_DEL CG44434 DOWNSTREAM 1.15e-05
2R_14565483_DEL CG44435 DOWNSTREAM 1.15e-05
2R_20308502_SNP prom INTRON 1.18e-05
2R_17103833_SNP CG15661 SYNONYMOUS_CODING 1.29e-05
3R_12997215_SNP Mur89F INTRON 1.29e-05
3R_17312898_SNP CG7922 SYNONYMOUS_CODING 1.31e-05
3R_12317718_SNP Cad89D SYNONYMOUS_CODING 1.33e-05
X_9640945_SNP Sp1 INTRON 1.33e-05
2R_11082462_SNP CG43829 UPSTREAM 1.39e-05
2L_14847936_SNP CG15279 INTRON 1.40e-05
3R_4247244_SNP CG45263 INTRON 1.45e-05
3R_4247244_SNP Obp85a INTRON 1.45e-05
3R_12992188_SNP Mur89F INTRON 1.48e-05
X_18251508_DEL 1.49e-05
2L_18774061_SNP ham INTRON 1.53e-05
2L_18774061_SNP CR43804 INTRON 1.53e-05
2R_20313919_SNP prom INTRON 1.53e-05
3R_17312919_SNP CG7922 SYNONYMOUS_CODING 1.60e-05
3R_12985727_SNP Mur89F INTRON 1.63e-05
2L_2612282_INS CG15395 DOWNSTREAM 1.65e-05
2R_20313917_SNP prom INTRON 1.67e-05
2R_20313922_DEL prom INTRON 1.67e-05
2R_20313930_SNP prom INTRON 1.67e-05
2R_20313933_SNP prom INTRON 1.67e-05
2R_20313935_INS prom INTRON 1.67e-05
2R_20313938_SNP prom INTRON 1.67e-05
2R_20313940_MNP prom INTRON 1.67e-05
2R_20308565_SNP prom INTRON 1.69e-05
X_18251504_SNP 1.69e-05
X_18251505_SNP 1.69e-05
3L_4694906_SNP RhoGEF64C INTRON 1.71e-05
3L_4694906_SNP CG15876 INTRON 1.71e-05
2R_17037739_INS CG30389 INTRON 1.72e-05
2R_1991490_SNP EcR INTRON 1.85e-05
2R_1991491_SNP EcR INTRON 1.85e-05
3L_12833443_SNP CG10960 INTRON 1.87e-05
2L_7751402_SNP CG7203 DOWNSTREAM 1.91e-05
3R_22095003_SNP CG6154 INTRON 1.91e-05
2R_20308558_SNP prom INTRON 1.92e-05
2L_9792840_SNP CG13123 INTRON 1.93e-05
2L_9792840_SNP nAChRalpha6 INTRON 1.93e-05
3L_5853164_SNP 1.96e-05
3R_12992004_SNP Mur89F INTRON 2.03e-05
2R_5227902_SNP CG13954 INTRON 2.05e-05
2R_5227902_SNP CG13739 INTRON 2.05e-05
2R_3551128_SNP CG2065 UPSTREAM 2.07e-05
2R_3551128_SNP CG2070 UPSTREAM 2.07e-05
2R_3546887_SNP CG1339 SYNONYMOUS_CODING 2.09e-05
2R_3546887_SNP CG30495 SYNONYMOUS_CODING 2.09e-05
X_14994016_SNP Rab3-GEF SYNONYMOUS_CODING 2.11e-05
X_9641804_SNP Sp1 INTRON 2.12e-05
3R_19565063_SNP Hmgcr INTRON 2.13e-05
2R_20313914_SNP prom INTRON 2.16e-05
2R_20313927_SNP prom INTRON 2.16e-05
X_9641643_SNP Sp1 INTRON 2.17e-05
3R_9755267_SNP 2.25e-05
3R_9949217_SNP twf SYNONYMOUS_CODING 2.25e-05
3R_9949217_SNP 140up SYNONYMOUS_CODING 2.25e-05
X_12403029_SNP CG2556 INTRON 2.26e-05
3L_4694662_SNP CG15876 SYNONYMOUS_CODING 2.27e-05
3L_4694662_SNP RhoGEF64C SYNONYMOUS_CODING 2.27e-05
2R_20308533_SNP prom INTRON 2.30e-05
X_9641727_SNP Sp1 INTRON 2.31e-05
3R_11367299_SNP CG18519 NON_SYNONYMOUS_CODING 2.32e-05
3R_13448666_DEL tRNA:CR33534 DOWNSTREAM 2.37e-05
3R_13448666_DEL CG14323 DOWNSTREAM 2.37e-05
3L_8696154_SNP 2.44e-05
2R_20313916_SNP prom INTRON 2.46e-05
X_7604829_INS 2.52e-05
3L_3844015_SNP 2.63e-05
3R_12992053_DEL Mur89F INTRON 2.66e-05
2R_20309106_SNP prom INTRON 2.67e-05
3R_12997318_SNP Mur89F INTRON 2.67e-05
2L_9508608_SNP CG33298 INTRON 2.71e-05
2L_1964167_SNP erm INTRON 2.72e-05
3L_16725026_SNP 2.81e-05
3R_12992010_SNP Mur89F INTRON 2.85e-05
2R_20313911_SNP prom INTRON 2.86e-05
X_18167373_DEL 2.88e-05
3R_13418241_SNP 2.89e-05
3R_24617170_SNP intr UTR_3_PRIME 2.93e-05
3R_24617170_SNP CG34295 UTR_3_PRIME 2.93e-05
X_6297829_SNP 2.93e-05
3R_9755266_SNP 2.97e-05
3R_11388164_SNP 2.99e-05
2R_12230279_SNP CG7997 INTRON 3.02e-05
X_13151875_SNP mew INTRON 3.03e-05
X_13151875_SNP CG15742 INTRON 3.03e-05
2R_8502479_SNP CG45086 INTRON 3.05e-05
2R_8502479_SNP Galphaq INTRON 3.05e-05
3L_4694850_SNP RhoGEF64C INTRON 3.07e-05
3L_4694850_SNP CG15876 INTRON 3.07e-05
3R_12992033_SNP Mur89F INTRON 3.07e-05
2L_3885863_SNP capu INTRON 3.08e-05
2R_7752530_SNP CG42531 DOWNSTREAM 3.09e-05
2R_7752530_SNP Damm DOWNSTREAM 3.09e-05
2L_7751417_SNP CG7203 DOWNSTREAM 3.10e-05
2L_5964548_SNP psd INTRON 3.13e-05
2L_5964548_SNP CG13992 INTRON 3.13e-05
3R_13900177_SNP 3.14e-05
3R_13131971_SNP 3.19e-05
X_18167335_SNP 3.19e-05
X_7587146_DEL CHES-1-like INTRON 3.36e-05
X_3376568_SNP CR44999 INTRON 3.38e-05
X_3376568_SNP CG10804 INTRON 3.38e-05
2R_20263548_SNP bs UTR_3_PRIME 3.40e-05
2L_7751376_SNP CG7203 DOWNSTREAM 3.41e-05
2L_7751399_SNP CG7203 DOWNSTREAM 3.42e-05
2R_12628367_SNP 3.46e-05
2R_7023942_SNP BBS4 INTRON 3.50e-05
2R_7023949_SNP BBS4 INTRON 3.50e-05
2R_7023958_SNP BBS4 INTRON 3.50e-05
2R_7023976_SNP BBS4 INTRON 3.50e-05
3R_17309679_SNP CG7922 NON_SYNONYMOUS_CODING 3.50e-05
2R_12369476_SNP 3.52e-05
X_18251526_SNP 3.53e-05
3R_4313545_SNP 3.54e-05
2L_5867252_SNP rau INTRON 3.61e-05
3R_13524790_SNP osa INTRON 3.61e-05
X_14993421_SNP Rab3-GEF INTRON 3.63e-05
2R_20263633_SNP bs UTR_3_PRIME 3.71e-05
3R_13332029_SNP Dscam3 UPSTREAM 3.71e-05
X_7588127_SNP CHES-1-like INTRON 3.74e-05
3R_11364111_SNP CG18519 SYNONYMOUS_CODING 3.75e-05
X_18251390_SNP 3.75e-05
2R_20307893_SNP prom NON_SYNONYMOUS_CODING 3.76e-05
3R_12435590_SNP NPF INTRON 3.76e-05
3R_19770578_SNP CG12268 INTRON 3.84e-05
3R_19770583_SNP CG12268 INTRON 3.84e-05
3R_19770588_SNP CG12268 INTRON 3.84e-05
3L_2294717_SNP MsR2 INTRON 3.86e-05
3R_11129613_SNP Tm1 INTRON 3.90e-05
X_6297782_SNP 3.98e-05
3R_5824500_SNP Spn85F NON_SYNONYMOUS_CODING 3.99e-05
3R_5824500_SNP CG5359 NON_SYNONYMOUS_CODING 3.99e-05
X_18252264_SNP CG6106 UPSTREAM 4.04e-05
X_5631703_INS CG32758 UTR_5_PRIME 4.04e-05
X_5631703_INS IntS6 UTR_5_PRIME 4.04e-05
3R_10655623_SNP btsz INTRON 4.07e-05
2L_7751543_DEL CG7203 DOWNSTREAM 4.08e-05
3L_2293540_SNP MsR2 INTRON 4.09e-05
2R_12628349_SNP 4.11e-05
3R_13002842_SNP Mur89F INTRON 4.12e-05
2R_12218440_SNP Vha44 INTRON 4.14e-05
3R_22094891_DEL CG6154 INTRON 4.17e-05
4_212564_SNP CG2316 INTRON 4.17e-05
3R_11288771_SNP AdamTS-A INTRON 4.21e-05
3L_3812775_SNP CG12006 SYNONYMOUS_CODING 4.23e-05
2R_7752475_SNP CG42531 DOWNSTREAM 4.24e-05
2R_7752475_SNP Damm DOWNSTREAM 4.24e-05
2R_8722614_SNP 4.28e-05
X_18252738_DEL CG6106 UPSTREAM 4.28e-05
X_18252748_SNP CG6106 UPSTREAM 4.28e-05
X_18251456_SNP 4.32e-05
2R_20309964_SNP prom INTRON 4.33e-05
2R_12628403_SNP 4.36e-05
2R_20263506_SNP bs NON_SYNONYMOUS_CODING 4.36e-05
2R_20263738_SNP bs UTR_3_PRIME 4.36e-05
2R_20263740_INS bs UTR_3_PRIME 4.36e-05
2R_20263742_SNP bs UTR_3_PRIME 4.36e-05
2R_20309307_SNP prom INTRON 4.37e-05
X_14994013_SNP Rab3-GEF SYNONYMOUS_CODING 4.37e-05
X_14994019_SNP Rab3-GEF SYNONYMOUS_CODING 4.37e-05
2R_2998199_SNP esn INTRON 4.46e-05
3R_22081036_SNP Ald DOWNSTREAM 4.46e-05
2R_20301145_SNP CG45068 SYNONYMOUS_CODING 4.47e-05
2R_20301145_SNP CG45069 SYNONYMOUS_CODING 4.47e-05
3L_6639773_SNP 4.47e-05
2R_20313912_SNP prom INTRON 4.51e-05
3L_14197669_SNP nuf INTRON 4.54e-05
3L_14197669_SNP CG32141 INTRON 4.54e-05
X_4985802_SNP CG15465 INTRON 4.56e-05
X_4985802_SNP rg INTRON 4.56e-05
3L_3329652_SNP CR45380 DOWNSTREAM 4.62e-05
3L_3329652_SNP CG14961 DOWNSTREAM 4.62e-05
3R_13419831_SNP CG7587 UPSTREAM 4.63e-05
2R_16825523_SNP Rx DOWNSTREAM 4.64e-05
3R_14850882_SNP CG14285 NON_SYNONYMOUS_CODING 4.64e-05
3R_14850882_SNP CG14286 NON_SYNONYMOUS_CODING 4.64e-05
3L_3812970_SNP CG12006 SYNONYMOUS_CODING 4.66e-05
2L_3396579_SNP CR44792 DOWNSTREAM 4.67e-05
3R_17309591_SNP CG7922 INTRON 4.67e-05
3R_17314258_DEL 4.68e-05
X_12899932_SNP rad INTRON 4.68e-05
X_4986248_DEL CG15465 INTRON 4.74e-05
X_4986248_DEL rg INTRON 4.74e-05
2R_20269748_SNP mAChR-A INTRON 4.79e-05
2L_16699438_SNP grp NON_SYNONYMOUS_CODING 4.81e-05
2L_16699438_SNP CR43669 NON_SYNONYMOUS_CODING 4.81e-05
2R_12451205_DEL DAT INTRON 4.81e-05
3L_7607016_SNP CG33275 INTRON 4.82e-05
3R_9755264_SNP 4.83e-05
2L_1611896_SNP CG14352 INTRON 4.85e-05
2L_1611896_SNP RFeSP INTRON 4.85e-05
2R_14222653_DEL sbb INTRON 4.87e-05
2L_3396577_SNP CR44792 DOWNSTREAM 4.89e-05
3L_14092468_SNP 4.89e-05
3R_10974341_SNP 4.94e-05
X_5656121_SNP MAPk-Ak2 INTRON 4.94e-05
3L_9760566_SNP CG8177 INTRON 4.96e-05
X_20907278_SNP Ntf-2 INTRON 4.97e-05
X_20907279_SNP Ntf-2 INTRON 4.97e-05
3R_17309145_SNP CG7922 SYNONYMOUS_CODING 4.98e-05
2R_20313730_SNP prom INTRON 5.01e-05
2L_2592883_SNP CG15394 DOWNSTREAM 5.04e-05
3L_14188075_SNP nuf INTRON 5.09e-05
X_18167332_SNP 5.14e-05
3R_17313012_SNP CG7922 DOWNSTREAM 5.15e-05
2L_2612781_DEL 5.21e-05
2R_1618770_SNP 5.26e-05
X_14993547_SNP Rab3-GEF INTRON 5.29e-05
2L_14087933_SNP nAChRalpha5 INTRON 5.32e-05
2L_3013371_SNP CG17265 INTRON 5.32e-05
X_18251495_SNP 5.38e-05
3L_10374559_INS 5.47e-05
3L_12404345_SNP CG32103 INTRON 5.48e-05
2R_16825517_SNP Rx DOWNSTREAM 5.52e-05
2R_20260408_SNP bs INTRON 5.60e-05
3R_13421753_SNP Sgs5 UTR_3_PRIME 5.63e-05
3R_13421753_SNP CG7606 UTR_3_PRIME 5.63e-05
2L_2612787_SNP 5.66e-05
2R_3769346_SNP Dgk UTR_5_PRIME 5.66e-05
X_7587379_SNP CHES-1-like INTRON 5.67e-05
3L_13974741_SNP CG17364 INTRON 5.74e-05
X_5908964_SNP CR44499 DOWNSTREAM 5.74e-05
3R_12985703_SNP Mur89F INTRON 5.79e-05
X_14994112_SNP Rab3-GEF SYNONYMOUS_CODING 5.81e-05
2R_19645190_SNP CG9850 INTRON 5.82e-05
X_9641716_SNP Sp1 INTRON 5.85e-05
3R_3439387_SNP CG34127 INTRON 5.86e-05
3R_12317562_SNP Cad89D INTRON 5.91e-05
3R_12317613_SNP Cad89D SYNONYMOUS_CODING 5.91e-05
X_9640876_SNP Sp1 INTRON 5.92e-05
X_9640960_SNP Sp1 INTRON 5.92e-05
2R_11632091_SNP CG30089 INTRON 5.98e-05
3R_13332023_DEL Dscam3 UPSTREAM 6.02e-05
3L_12544228_SNP sowah INTRON 6.04e-05
3R_10974468_SNP 6.10e-05
3R_19565035_SNP Hmgcr INTRON 6.10e-05
3R_19565036_SNP Hmgcr INTRON 6.10e-05
2R_20233630_SNP bs INTRON 6.16e-05
2R_19022154_SNP 6.27e-05
2R_20280846_SNP slik DOWNSTREAM 6.27e-05
3L_13935202_SNP CG32137 INTRON 6.35e-05
X_9210165_SNP CR44534 DOWNSTREAM 6.36e-05
2R_19551513_SNP Pde8 INTRON 6.37e-05
X_6443825_SNP CG34417 INTRON 6.44e-05
X_6444241_SNP CG34417 INTRON 6.44e-05
X_6446431_SNP CG34417 INTRON 6.44e-05
3L_18019988_SNP Eip75B INTRON 6.45e-05
3R_9949202_SNP twf SYNONYMOUS_CODING 6.45e-05
3R_9949202_SNP 140up SYNONYMOUS_CODING 6.45e-05
2R_7402770_SNP 6.47e-05
3R_12985546_SNP Mur89F SYNONYMOUS_CODING 6.50e-05
X_3945990_SNP 6.50e-05
3R_17313053_SNP CG7922 DOWNSTREAM 6.52e-05
3R_12992392_SNP Mur89F INTRON 6.53e-05
2R_11082631_SNP CG43829 UPSTREAM 6.56e-05
X_4986299_SNP rg INTRON 6.56e-05
X_4986299_SNP CG15465 INTRON 6.56e-05
2L_5613850_SNP CG14010 INTRON 6.58e-05
2R_20276009_SNP mAChR-A INTRON 6.63e-05
3L_17773480_SNP 6.66e-05
3R_12992032_SNP Mur89F INTRON 6.69e-05
X_14518598_SNP NetA INTRON 6.73e-05
2L_14847382_SNP CG15279 INTRON 6.75e-05
2R_7419910_SNP 6.80e-05
X_4986296_DEL rg INTRON 6.85e-05
X_4986296_DEL CG15465 INTRON 6.85e-05
3R_10655781_SNP btsz INTRON 6.88e-05
2R_12696827_SNP 7.02e-05
2R_20263539_SNP bs UTR_3_PRIME 7.04e-05
3R_13928920_SNP sr INTRON 7.14e-05
2L_9962482_SNP CG5850 SYNONYMOUS_CODING 7.15e-05
2L_9962482_SNP CR43683 SYNONYMOUS_CODING 7.15e-05
2R_17103509_SNP CG15661 SYNONYMOUS_CODING 7.15e-05
3R_17772582_SNP 7.17e-05
3R_12993769_SNP Mur89F INTRON 7.24e-05
4_214743_SNP CG2316 UPSTREAM 7.30e-05
4_214743_SNP CR44441 UPSTREAM 7.30e-05
X_14991195_SNP Rab3-GEF INTRON 7.35e-05
2R_7266548_SNP Tsp47F UTR_5_PRIME 7.37e-05
3R_19770553_SNP CG12268 INTRON 7.39e-05
3L_13379241_SNP CG10171 UTR_3_PRIME 7.40e-05
3L_13379241_SNP CG14110 UTR_3_PRIME 7.40e-05
2L_4353069_SNP CG15429 SYNONYMOUS_CODING 7.44e-05
2R_20276477_SNP mAChR-A INTRON 7.47e-05
2L_14858849_SNP 7.48e-05
X_3945994_SNP 7.48e-05
X_4883035_SNP CR44833 INTRON 7.48e-05
2R_10963284_SNP 7.49e-05
2L_5684156_SNP 7.51e-05
2L_1611892_SNP CG14352 INTRON 7.54e-05
2L_1611892_SNP RFeSP INTRON 7.54e-05
3R_3350035_SNP alpha-Est6 DOWNSTREAM 7.54e-05
3R_3350035_SNP alpha-Est7 DOWNSTREAM 7.54e-05
X_13400492_SNP Neto INTRON 7.54e-05
2R_20275800_SNP mAChR-A INTRON 7.55e-05
3R_22094885_SNP CG6154 INTRON 7.57e-05
2R_9208823_SNP 7.61e-05
3L_14070418_SNP btl INTRON 7.63e-05
3R_12996262_SNP Mur89F INTRON 7.65e-05
3R_17309666_SNP CG7922 INTRON 7.70e-05
3R_9755213_SNP 7.77e-05
2L_14839600_SNP CR43805 DOWNSTREAM 7.85e-05
3L_13381805_SNP Poc1 INTRON 7.88e-05
3L_13381805_SNP CG10171 INTRON 7.88e-05
X_14993353_SNP Rab3-GEF INTRON 7.90e-05
X_13403437_SNP Neto INTRON 8.03e-05
2R_2589702_SNP CG45092 INTRON 8.11e-05
2R_2589702_SNP CG3409 INTRON 8.11e-05
2L_14839629_INS CR43805 DOWNSTREAM 8.12e-05
3L_7002948_SNP Mp INTRON 8.12e-05
2R_20270526_SNP mAChR-A INTRON 8.25e-05
2L_5942852_SNP Sfp26Ad SYNONYMOUS_CODING 8.31e-05
2L_5942852_SNP CR45289 SYNONYMOUS_CODING 8.31e-05
X_9641740_SNP Sp1 INTRON 8.32e-05
2L_8590036_SNP Sema-1a INTRON 8.33e-05
2L_8590036_SNP CR43855 INTRON 8.33e-05
3R_3453798_SNP CG34127 INTRON 8.35e-05
3R_3453798_SNP CR44332 INTRON 8.35e-05
4_216261_SNP CR44441 EXON 8.38e-05
2L_3233946_SNP 8.43e-05
2L_8325829_SNP CG7781 UPSTREAM 8.44e-05
3R_17307710_SNP CG7922 UPSTREAM 8.47e-05
3L_6639868_SNP 8.62e-05
2R_19551586_SNP Pde8 INTRON 8.63e-05
2L_3121567_SNP toc INTRON 8.68e-05
2L_5964588_SNP psd INTRON 8.69e-05
2L_5964588_SNP CG13992 INTRON 8.69e-05
2L_6133846_SNP CR45719 UPSTREAM 8.74e-05
2L_9810997_SNP nAChRalpha6 INTRON 8.74e-05
2L_9811000_SNP nAChRalpha6 INTRON 8.74e-05
3L_13383636_SNP Poc1 UPSTREAM 8.77e-05
X_7585641_SNP CHES-1-like INTRON 8.81e-05
3R_17961180_SNP SKIP INTRON 8.88e-05
X_4533152_SNP pon DOWNSTREAM 8.92e-05
X_4533152_SNP CG3081 DOWNSTREAM 8.92e-05
2R_16711423_SNP insc SYNONYMOUS_CODING 8.93e-05
2L_9962445_SNP CG5850 INTRON 9.04e-05
2L_9962445_SNP CR43683 INTRON 9.04e-05
X_14993974_SNP Rab3-GEF SYNONYMOUS_CODING 9.06e-05
3L_2293647_SNP MsR2 INTRON 9.08e-05
3R_5916394_SNP CR45054 DOWNSTREAM 9.08e-05
3R_5916394_SNP mir-317 DOWNSTREAM 9.08e-05
3R_7317976_SNP 9.08e-05
3R_17313134_SNP CG7922 DOWNSTREAM 9.11e-05
3R_5851098_SNP Mical INTRON 9.16e-05
3R_5851098_SNP CG31407 INTRON 9.16e-05
2R_12835148_SNP Vha16-4 DOWNSTREAM 9.17e-05
2R_12835148_SNP CG34190 DOWNSTREAM 9.17e-05
3R_5285535_SNP GstZ2 INTRON 9.18e-05
3R_9755225_SNP 9.19e-05
X_7585423_SNP CHES-1-like INTRON 9.23e-05
3R_13434002_SNP sll SYNONYMOUS_CODING 9.28e-05
3R_13434033_SNP sll UTR_3_PRIME 9.28e-05
2R_20257613_SNP bs INTRON 9.30e-05
2R_20257613_SNP CR44811 INTRON 9.30e-05
2L_17966311_SNP CG5674 INTRON 9.31e-05
2L_17966311_SNP btv INTRON 9.31e-05
3R_25873501_SNP CG7943 SYNONYMOUS_CODING 9.31e-05
3R_25873501_SNP CG15528 SYNONYMOUS_CODING 9.31e-05
2L_7751378_SNP CG7203 DOWNSTREAM 9.33e-05
3R_20707017_SNP CG11089 UTR_3_PRIME 9.35e-05
3R_20707017_SNP CG31121 UTR_3_PRIME 9.35e-05
3R_7994186_SNP 9.36e-05
4_217807_DEL CG31998 DOWNSTREAM 9.40e-05
X_4985793_MNP rg INTRON 9.40e-05
X_4985793_MNP CG15465 INTRON 9.40e-05
2L_3427281_SNP pgant2 UPSTREAM 9.43e-05
3L_12404239_SNP CG32103 INTRON 9.45e-05
2R_3525595_SNP CG43340 INTRON 9.47e-05
3R_5721722_SNP Glut4EF INTRON 9.56e-05
2R_11006133_SNP chn INTRON 9.60e-05
2L_16629322_SNP CG42389 INTRON 9.61e-05
2L_16629322_SNP CR44151 INTRON 9.61e-05
X_7585873_SNP CHES-1-like INTRON 9.63e-05
2R_3772313_SNP Dgk INTRON 9.68e-05
2L_7008310_SNP uif INTRON 9.69e-05
2L_14847378_SNP CG15279 INTRON 9.70e-05
3R_12996121_SNP Mur89F INTRON 9.76e-05
2R_16875395_SNP CG3216 SYNONYMOUS_CODING 9.77e-05
2R_20280640_SNP slik DOWNSTREAM 9.79e-05
3R_9585922_SNP CG34383 INTRON 9.90e-05
3R_17313074_SNP CG7922 DOWNSTREAM 9.93e-05
2L_14849398_SNP CG15279 INTRON 9.95e-05
2L_2601212_SNP CR44789 EXON 9.95e-05

5.5.2 Group count

grps n
INTRON 217
DOWNSTREAM 43
SYNONYMOUS_CODING 40
UPSTREAM 19
NON_SYNONYMOUS_CODING 16
UTR_3_PRIME 15
UTR_5_PRIME 8
EXON 2

5.5.3 Gene counts

gene n
prom 23
Mur89F 19
bs 11
CG7922 11
Rab3-GEF 9
Sp1 8
CG7203 6
CHES-1-like 6
BBS4 5
CG15465 5
CG45068 5
CG45069 5
mAChR-A 5
rg 5
CG12268 4
CG15279 4
CG6106 4
Cad89D 3
CG15876 3
CG34417 3
CG6154 3
Hmgcr 3
MsR2 3
nAChRalpha6 3
RhoGEF64C 3
140up 2
btsz 2
CG10171 2
CG12006 2
CG13992 2
CG14352 2
CG15661 2
CG18519 2
CG2316 2
CG32103 2
CG34127 2
CG42531 2
CG43829 2
CG5850 2
CR43683 2
CR43805 2
CR44441 2
CR44792 2
CR44811 2
Damm 2
Dgk 2
Dscam3 2
EcR 2
IntS6 2
Lgr1 2
Mp 2
Neto 2
Ntf-2 2
nuf 2
p 2
Pde8 2
Poc1 2
psd 2
RFeSP 2
Rx 2
slik 2
sll 2
twf 2
AdamTS-A 1
Ald 1
alpha-Est6 1
alpha-Est7 1
bel 1
btl 1
btv 1
capu 1
CG10804 1
CG10960 1
CG11073 1
CG11089 1
CG13123 1
CG1339 1
CG13739 1
CG13954 1
CG14010 1
CG14110 1
CG14285 1
CG14286 1
CG14323 1
CG14961 1
CG15394 1
CG15395 1
CG15429 1
CG15528 1
CG15742 1
CG17265 1
CG17364 1
CG2065 1
CG2070 1
CG2556 1
CG30089 1
CG30389 1
CG30495 1
CG3081 1
CG31121 1
CG31407 1
CG31998 1
CG32137 1
CG32141 1
CG3216 1
CG32758 1
CG33275 1
CG33298 1
CG3409 1
CG34190 1
CG34295 1
CG34383 1
CG42383 1
CG42389 1
CG43340 1
CG44434 1
CG44435 1
CG45086 1
CG45092 1
CG45263 1
CG5359 1
CG5361 1
CG5674 1
CG7587 1
CG7606 1
CG7781 1
CG7943 1
CG7997 1
CG8177 1
CG9850 1
chn 1
CR32773 1
CR43669 1
CR43804 1
CR43855 1
CR44151 1
CR44332 1
CR44499 1
CR44534 1
CR44789 1
CR44833 1
CR44999 1
CR45054 1
CR45289 1
CR45380 1
CR45719 1
DAT 1
Eip75B 1
erm 1
esn 1
Galphaq 1
Glut4EF 1
grp 1
GstZ2 1
ham 1
insc 1
intr 1
MAPk-Ak2 1
mew 1
Mical 1
mir-317 1
msl-2 1
nAChRalpha5 1
NetA 1
NPF 1
Obp85a 1
osa 1
Pdsw 1
pgant2 1
pon 1
rad 1
rau 1
sbb 1
Sema-1a 1
Sfp26Ad 1
Sgs5 1
SKIP 1
sowah 1
Spn85F 1
sr 1
Tm1 1
toc 1
trio 1
tRNA:CR33534 1
Tsp47F 1
uif 1
Vha16-4 1
Vha44 1

6 Phenotypes

6.1 CTmin

6.2 CTmax

6.3 Thermal Breadth Correlation

6.3.1 CTmin

6.3.2 CTmax